Planteome: Term Details for "DNA-templated transcription, initiation" (GO:0006352)

You are using the Cyverse mirror of the Planteome Ontology Browser. The main site is at browser.planteome.org.

Notice

Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page.

Term Information

Accession: GO:0006352
Name: DNA-templated transcription, initiation
Ontology: biological_process
Synonyms: DNA-dependent RNA polymerase complex assembly at promoter, DNA-dependent transcription, initiation, initiation of DNA-dependent transcription, initiation of transcription, DNA-dependent, transcription initiation factor activity, transcription initiation, DNA-dependent
Alternate IDs: None
Definition: Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription. Source: PMID:18280161, GOC:txnOH, GOC:jid
Comment: Note that promoter clearance is represented as a separate step, not part_of either initiation or elongation.
History: See term history for GO:0006352 at QuickGO
Subset: goslim_yeast
Related: Link to all annotated objects annotated to DNA-templated transcription, initiation.; Link to all direct and indirect annotations to DNA-templated transcription, initiation.; Link to all direct and indirect annotations download (limited to first 10,000) for DNA-templated transcription, initiation.
Feedback: Contact the Planteome feedback if you find mistakes or have concerns about the data you find here.
Comments, changes to terms, or requests for new ontology terms can be made at GO issue tracker on GitHub.

Filter results

External term view.

Viewing options

BFO:0000001 entity
BFO:0000003 occurrent
BFO:0000015 process
GO:0008150 biological_process
GO:0008152 metabolic process
GO:0044237 cellular metabolic process
GO:0009987 cellular process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0009058 biosynthetic process
GO:0006725 cellular aromatic compound metabolic process
GO:0044249 cellular biosynthetic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0044238 primary metabolic process
GO:0019438 aromatic compound biosynthetic process
GO:0044260 cellular macromolecule metabolic process
GO:0044271 cellular nitrogen compound biosynthetic process
GO:0018130 heterocycle biosynthetic process
GO:0009059 macromolecule biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:1901362 organic cyclic compound biosynthetic process
GO:0032774 RNA biosynthetic process
GO:0034645 cellular macromolecule biosynthetic process
GO:0010467 gene expression
GO:0097659 nucleic acid-templated transcription
GO:0034654 nucleobase-containing compound biosynthetic process
GO:0016070 RNA metabolic process
GO:0006351 transcription, DNA-templated
GO:0006352 DNA-templated transcription, initiation
GO:0001112 DNA-templated transcription open complex formation
GO:0001173 DNA-templated transcriptional start site selection
GO:2000143 negative regulation of DNA-templated transcription, initiation
GO:2000144 positive regulation of DNA-templated transcription, initiation
GO:2000142 regulation of DNA-templated transcription, initiation
GO:0001123 transcription initiation from bacterial-type RNA polymerase promoter
GO:0006391 transcription initiation from mitochondrial promoter
GO:0006361 transcription initiation from RNA polymerase I promoter
GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0006384 transcription initiation from RNA polymerase III promoter
GO:0070897 transcription preinitiation complex assembly

Parents of DNA-templated transcription, initiation (GO:0006352)

subject	relation	object
DNA-templated transcription, initiation	BFO:0000050	transcription, DNA-templated (GO:0006351)
DNA-templated transcription, initiation	is_a	RNA biosynthetic process (GO:0032774)

Children of DNA-templated transcription, initiation (GO:0006352)

subject	relation	object
transcription preinitiation complex assembly (GO:0070897)	BFO:0000050	DNA-templated transcription, initiation
positive regulation of DNA-templated transcription, initiation (GO:2000144)	RO:0002213	DNA-templated transcription, initiation
transcription initiation from RNA polymerase III promoter (GO:0006384)	is_a	DNA-templated transcription, initiation
DNA-templated transcription open complex formation (GO:0001112)	BFO:0000050	DNA-templated transcription, initiation
transcription initiation from mitochondrial promoter (GO:0006391)	is_a	DNA-templated transcription, initiation
negative regulation of DNA-templated transcription, initiation (GO:2000143)	RO:0002212	DNA-templated transcription, initiation
DNA-templated transcriptional start site selection (GO:0001173)	BFO:0000050	DNA-templated transcription, initiation
transcription initiation from RNA polymerase I promoter (GO:0006361)	is_a	DNA-templated transcription, initiation
transcription initiation from bacterial-type RNA polymerase promoter (GO:0001123)	is_a	DNA-templated transcription, initiation
regulation of DNA-templated transcription, initiation (GO:2000142)	RO:0002211	DNA-templated transcription, initiation
transcription initiation from RNA polymerase II promoter (GO:0006367)	is_a	DNA-templated transcription, initiation