Planteome: Term Details for "chromatin organization involved in regulation of transcription" (GO:0034401)

You are using the Cyverse mirror of the Planteome Ontology Browser. The main site is at browser.planteome.org.

Notice

Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page.

Term Information

Accession: GO:0034401
Name: chromatin organization involved in regulation of transcription
Ontology: biological_process
Synonyms: establishment or maintenance of chromatin architecture during transcription, regulation of transcription by chromatin organisation, regulation of transcription by chromatin organization, activation of global transcription from RNA polymerase II promoter by histone modification, activation of transcription from RNA polymerase II promoter by histone modification, positive regulation of gene-specific transcription from RNA polymerase II promoter by histone modification, positive regulation of global transcription from Pol II promoter by histone modification, positive regulation of transcription from Pol II promoter by histone modification, positive regulation of transcription from RNA polymerase II promoter by histone modification, positive regulation of transcription from RNA polymerase II promoter, global by histone modification, regulation of gene-specific transcription from RNA polymerase II promoter by histone modification, regulation of global transcription from Pol II promoter by histone modification, regulation of transcription from Pol II promoter by histone modification, regulation of transcription from RNA polymerase II promoter by histone modification, regulation of transcription from RNA polymerase II promoter, global by histone modification, stimulation of global transcription from RNA polymerase II promoter by histone modification, stimulation of transcription from RNA polymerase II promoter by histone modification, up regulation of global transcription from RNA polymerase II promoter by histone modification, up regulation of transcription from RNA polymerase II promoter by histone modification, up-regulation of global transcription from RNA polymerase II promoter by histone modification, up-regulation of transcription from RNA polymerase II promoter by histone modification, upregulation of global transcription from RNA polymerase II promoter by histone modification, upregulation of transcription from RNA polymerase II promoter by histone modification
Alternate IDs: GO:1903757, GO:1903756
Definition: Any cellular process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin that modulates the rate, frequency or extent of DNA-dependent transcription. Source: GOC:curators, PMID:21102443
Comment: None
History: See term history for GO:0034401 at QuickGO
Subset: None
Related: Link to all annotated objects annotated to chromatin organization involved in regulation of transcription.; Link to all direct and indirect annotations to chromatin organization involved in regulation of transcription.; Link to all direct and indirect annotations download (limited to first 10,000) for chromatin organization involved in regulation of transcription.
Feedback: Contact the Planteome feedback if you find mistakes or have concerns about the data you find here.
Comments, changes to terms, or requests for new ontology terms can be made at GO issue tracker on GitHub.

Filter results

External term view.

Viewing options

GO:0044237 cellular metabolic process
BFO:0000001 entity
GO:0008152 metabolic process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0008150 biological_process
GO:0006725 cellular aromatic compound metabolic process
GO:0044249 cellular biosynthetic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
BFO:0000003 occurrent
GO:1901360 organic cyclic compound metabolic process
GO:1901576 organic substance biosynthetic process
GO:0044238 primary metabolic process
GO:0019222 regulation of metabolic process
GO:0019438 aromatic compound biosynthetic process
GO:0065007 biological regulation
GO:0009058 biosynthetic process
GO:0044271 cellular nitrogen compound biosynthetic process
GO:0009987 cellular process
GO:0018130 heterocycle biosynthetic process
GO:0090304 nucleic acid metabolic process
GO:1901362 organic cyclic compound biosynthetic process
BFO:0000015 process
GO:0050789 regulation of biological process
GO:0031323 regulation of cellular metabolic process
GO:0051171 regulation of nitrogen compound metabolic process
GO:0080090 regulation of primary metabolic process
GO:0009059 macromolecule biosynthetic process
GO:0034654 nucleobase-containing compound biosynthetic process
GO:0050794 regulation of cellular process
GO:0060255 regulation of macromolecule metabolic process
GO:0019219 regulation of nucleobase-containing compound metabolic process
GO:0016070 RNA metabolic process
GO:0016043 cellular component organization
GO:0044260 cellular macromolecule metabolic process
GO:0009889 regulation of biosynthetic process
GO:0031326 regulation of cellular biosynthetic process
GO:0010556 regulation of macromolecule biosynthetic process
GO:0051252 regulation of RNA metabolic process
GO:0032774 RNA biosynthetic process
GO:0071840 cellular component organization or biogenesis
GO:0034645 cellular macromolecule biosynthetic process
GO:0010467 gene expression
GO:0097659 nucleic acid-templated transcription
GO:0006996 organelle organization
GO:2001141 regulation of RNA biosynthetic process
GO:0051276 chromosome organization
GO:2000112 regulation of cellular macromolecule biosynthetic process
GO:0010468 regulation of gene expression
GO:1903506 regulation of nucleic acid-templated transcription
GO:0006351 transcription, DNA-templated
GO:0006325 chromatin organization
GO:0006355 regulation of transcription, DNA-templated
GO:0034401 chromatin organization involved in regulation of transcription
GO:0097549 chromatin organization involved in negative regulation of transcription
GO:0048096 chromatin-mediated maintenance of transcription

Parents of chromatin organization involved in regulation of transcription (GO:0034401)

subject	relation	object
chromatin organization involved in regulation of transcription	is_a	chromatin organization (GO:0006325)
chromatin organization involved in regulation of transcription	BFO:0000050	regulation of transcription, DNA-templated (GO:0006355)

Children of chromatin organization involved in regulation of transcription (GO:0034401)

subject	relation	object
chromatin organization involved in negative regulation of transcription (GO:0097549)	is_a	chromatin organization involved in regulation of transcription
chromatin-mediated maintenance of transcription (GO:0048096)	is_a	chromatin organization involved in regulation of transcription